FastQCFastQC Report
Mon 25 Mar 2013
50.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 50.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 38835228
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 2747102 7.073737277916845 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 1933404 4.978479848245001 RNA PCR Primer, Index 1 (100% over 25bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1866362 4.805847927556908 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1625100 4.184602701444163 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 744510 1.9170995983337602 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 484862 1.2485107593548828 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 469707 1.2094869122436978 RNA PCR Primer, Index 1 (100% over 25bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 417781 1.0757784143819111 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 360913 0.9293443571388328 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA 228351 0.5879996378545789 No Hit
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 225110 0.5796541222829952 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 206807 0.5325242328949376 RNA PCR Primer, Index 1 (100% over 27bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 205488 0.5291278320807078 No Hit
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 202308 0.520939390390601 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 194918 0.5019102758969253 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 191163 0.4922412197502742 No Hit
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 189974 0.48917956655230654 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 184960 0.4762686084912389 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 165322 0.4257011185823346 RNA PCR Primer, Index 1 (100% over 25bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 157992 0.4068265029884722 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 157841 0.4064376807572753 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 145760 0.37532932727986046 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 145725 0.375239202921636 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 135501 0.3489125903934438 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 135058 0.3477718735164887 RNA PCR Primer, Index 1 (100% over 27bp)
ATGGGAGACCGCCTGGGAATACCGGGTGCTGTAGGCTTTGGAATTCTCG 134065 0.345214916724578 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCTGGAATTCTCGGGTGCCAA 130408 0.3357982087809553 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGTGGAATTCTCGGGTG 127135 0.32737029379613786 No Hit
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 126351 0.32535150817191033 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 125426 0.3229696501331214 RNA PCR Primer, Index 1 (100% over 27bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 120278 0.3097136445291373 RNA PCR Primer, Index 1 (100% over 33bp)
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTGGAATTCTCGGGTGC 113048 0.29109652710163053 No Hit
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 107218 0.2760843840031015 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTCTGGAATTCTCGGGTG 102312 0.26345152396169785 No Hit
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 91471 0.2355361477470919 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 87637 0.22566366804901983 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 78414 0.20191461216604675 RNA PCR Primer, Index 1 (100% over 26bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGG 77984 0.20080737005071786 RNA PCR Primer, Index 2 (97% over 35bp)
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTGGAATTCTCGGGTGCC 77882 0.20054472192103523 No Hit
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 74604 0.19210393202790002 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 73636 0.18961134977757824 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 73335 0.188836280296848 RNA PCR Primer, Index 1 (100% over 27bp)
CCGTGATCGTATAGTGGTTAGTACTCTGCGTTTGGAATTCTCGGGTGCC 68286 0.17583519787755592 No Hit
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 67454 0.17369281313347767 RNA PCR Primer, Index 1 (100% over 25bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 66852 0.1721426741720172 RNA PCR Primer, Index 1 (100% over 29bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 66674 0.17168432743590434 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTACATCTGGCTACTGGGTCTCTTGGAATTCTCGGGTGCCAAGGAAC 64881 0.16706738531314919 RNA PCR Primer, Index 1 (100% over 24bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 63620 0.1638203334354056 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 63426 0.16332078699267583 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 62690 0.16142560048829893 RNA PCR Primer, Index 1 (100% over 24bp)
CCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGAATTCTCGGGTGC 61047 0.1571949056150771 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC 59602 0.15347405711123932 No Hit
GCATTGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCAA 58439 0.1504793534365242 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGACTGGAATTCTCGGG 56278 0.14491481806158057 No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGATGGAATTCTCGGGTGC 55286 0.14236043625133346 No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 54018 0.139095359501945 RNA PCR Primer, Index 1 (100% over 26bp)
GCATTGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCCA 52806 0.13597448172571563 No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGTGGAATTCTCGGGTGC 51890 0.13361579852189873 No Hit
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 51321 0.1321506339553356 RNA PCR Primer, Index 1 (100% over 25bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 50776 0.13074726894869781 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 50656 0.13043827114907114 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 50379 0.12972500122826625 RNA PCR Primer, Index 1 (100% over 26bp)
AATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCC 50013 0.1287825579394049 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 49388 0.12717319439968267 RNA PCR Primer, Index 1 (100% over 28bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 48287 0.124338139588108 RNA PCR Primer, Index 1 (100% over 27bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 48157 0.12400339197184576 RNA PCR Primer, Index 6 (100% over 34bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCCTGGAATTCTCGGGTGCC 47398 0.12204898088920708 No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTTGGAATTCTCGGGTGC 47313 0.12183010744780487 No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTGGAATTCTCGGGTGC 46725 0.12031601822963418 No Hit
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 44785 0.11532055380233637 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 44379 0.11427511124693282 RNA PCR Primer, Index 1 (100% over 27bp)
TCCCACATGGTCTAGCGGTTAGGATTCCTGGTTTGGAATTCTCGGGTGC 44114 0.11359274110609059 No Hit
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 43948 0.11316529414994035 RNA PCR Primer, Index 1 (100% over 30bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 43142 0.11108985892911458 RNA PCR Primer, Index 1 (100% over 31bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 43066 0.11089416032268434 RNA PCR Primer, Index 1 (100% over 28bp)
GTCGGTAGAGCATCAGACTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 42017 0.10819300455761456 RNA PCR Primer, Index 1 (100% over 31bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 41922 0.10794838129957678 RNA PCR Primer, Index 1 (100% over 26bp)
ATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCA 41662 0.10727888606705233 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 41610 0.10714498702054742 RNA PCR Primer, Index 1 (100% over 27bp)
GAATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTC 41591 0.10709606236893987 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 41197 0.10608151959349897 RNA PCR Primer, Index 1 (100% over 26bp)
AGTAAGGTCAGCTAATTAAGCTATCGGGCCCTGGAATTCTCGGGTGCCA 41143 0.10594247058366697 No Hit
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 40989 0.10554592340747943 RNA PCR Primer, Index 1 (100% over 27bp)
TCCCTGTGGTCTAGTGGTTAGGATTCGGCGCTGGAATTCTCGGGTGCCA 40946 0.10543519919594653 No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATGGAATTCTCGGGTG 40567 0.10445928114545897 No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTGGAATTCTCGGGTGCC 40358 0.10392110997777584 No Hit
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 39624 0.10203107343672606 RNA PCR Primer, Index 1 (100% over 28bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 39260 0.10109378011119183 RNA PCR Primer, Index 1 (100% over 26bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 40582320 30.332663 296.75638 26
TTCTC 40155690 27.930725 275.77243 28
ATTCT 40238920 27.242943 268.72946 27
TCTCG 39952460 24.19578 239.96513 29
TGCCA 35880215 23.989275 263.05334 36
GCCAA 31949280 23.582464 290.83102 37
GAATT 41020865 23.536724 228.29312 25
CCAAG 31408295 23.18315 290.89972 38
GAACT 32404010 21.087902 256.04626 43
AACTC 24289210 20.591143 333.307 44
CTCGG 38380680 20.238098 208.6987 30
GGAAT 39828775 19.89753 198.58228 24
TGGAA 39136015 19.551443 198.44849 23
GTGCC 34326845 18.100515 207.6378 35
CAAGG 30835945 17.472412 223.3024 39
AAGGA 30486625 16.81425 217.5218 40
ACTCC 19109110 16.64313 342.13644 45
GGAAC 29278920 16.590164 223.06323 42
AGGAA 29882500 16.481056 217.63469 41
TCGGG 38233685 15.47643 160.13763 31
CGGGT 37798420 15.3002405 159.62813 32
GGTGC 36410960 14.738617 159.59198 34
GGGTG 37526770 11.660934 122.56213 33
CTCCA 10384790 9.04466 87.23797 45
TTGGA 17195495 7.781277 113.072876 22
CCAGT 9690635 6.4790945 92.08507 7
TCCAG 8864370 5.926659 49.359005 45
TATCA 7818560 5.8438683 223.44319 6
CAGAC 7502360 5.537656 220.94868 9
TTATC 7941010 5.3762994 202.41498 5
TCAGA 8203170 5.3384647 202.86946 8
GACTG 10219660 5.2452483 153.98117 11
CTGGA 10044070 5.1551275 51.01611 23
ATCAG 7579525 4.9326086 194.96278 7
ACTGA 7569135 4.9258466 194.82306 12
AGACT 7547655 4.9118676 195.05522 10
CTTAT 6762905 4.578687 202.29858 4
CTGAT 7645330 4.506765 176.4742 13
GTTGA 9929845 4.493437 130.49316 18
AGCTT 7358665 4.3377814 176.23796 2
TAGCT 7297800 4.3019032 176.21507 1
TGATG 9478520 4.2892046 135.41742 14
TGTTG 10401955 4.263686 122.28925 17
GCTTA 6798150 4.0073695 176.18768 3
CAGTC 5980150 3.9982889 32.75967 45
ATGTT 6972520 3.6238067 155.35779 16
CTTGG 7737150 3.5970352 50.613747 23
ATGGA 6966565 3.480334 50.735645 22
TTGAC 5631210 3.3194828 124.03427 19
GATGT 7248710 3.280174 135.51868 15
AGTCA 4609355 2.999679 27.542212 45
AGAAC 4171905 2.9973333 99.070984 15
TGACT 5014640 2.9560275 106.13693 20
GTGGA 7082775 2.7906199 13.255017 20
AAGAA 3731390 2.6094193 96.63273 14
AACTG 3967760 2.5821414 88.87687 17
ACTTG 4318985 2.5459526 54.544582 22
AAGCT 3805140 2.4763117 89.9299 1
CTGCC 3375565 2.3186543 94.58561 4
GTAGT 5122145 2.3178647 39.423885 5
TCACG 3418015 2.2852626 30.531254 22
CCTGG 4308775 2.2720132 13.156318 23
ACTGG 4348360 2.2317991 45.9457 22
GTCAC 3309225 2.212526 27.320288 45
CTGTT 4049930 2.1624706 73.69172 19
AGCTG 4191320 2.1511981 70.57891 2
ACTGT 3628045 2.1386578 80.25808 18
TTGAA 3621175 2.0777378 79.49973 11
AGTGG 5242155 2.0654135 44.961914 14
GTGGT 5775010 2.0610285 40.296215 15
GCCAG 3495300 2.0347333 80.33248 6
CAGTT 3446665 2.031738 81.1878 8
GACTT 3356150 1.9783812 54.149307 21
GGTAG 4974980 1.9601463 35.44613 4
GAAGA 3450920 1.9032815 76.01772 13
AGTTG 4187575 1.8949546 62.288704 9
TTTGG 4590430 1.881584 28.830738 21
GTTGG 5170755 1.8453772 49.885056 21
GTAGA 3687235 1.842057 27.703806 8
CGCCT 2624320 1.8026289 31.450153 29
TGAAG 3576665 1.7868187 69.05919 12
GCTGC 3269200 1.7238463 72.43444 3
TAGTG 3643960 1.648959 29.517282 13
TCGCC 2317695 1.59201 31.531162 28
TGGTT 3722630 1.525879 25.731972 16
TAGTA 2630795 1.5094831 49.89268 6
GCCTG 2762410 1.4566164 11.811396 30
GATGG 3616080 1.4247385 34.077553 21
TGTGG 3685200 1.3152014 8.604157 22
AGTAG 2586985 1.2923975 43.303085 7
AATCC 1514805 1.2841738 24.319927 8
TCAGT 2130105 1.2556531 36.49634 12
CAGTG 2400155 1.2318814 24.610632 13
ATAGT 2141375 1.2286663 39.52714 17
CATGG 2382800 1.222974 5.573078 23
CACGT 1824830 1.2200693 30.529535 23
AGAAT 1918110 1.2150123 29.674994 20
TAGAA 1868845 1.183806 29.658018 19
AGGTA 2361970 1.1799853 45.95522 3
CACGG 2022515 1.177375 12.527087 45
GTTTG 2854085 1.1698688 26.066072 20
TATAG 2019250 1.1585941 37.386322 16
GTATA 2013435 1.1552576 37.47444 15
TTGAT 2200260 1.1435344 40.13681 19
GCTGT 2456985 1.1422632 10.993366 20
TAGTT 2174910 1.1303594 35.51623 18
CATTG 1898210 1.1189556 30.733267 2
GGTTA 2471570 1.1184307 30.950108 17
GCTTG 2383745 1.1082135 15.646319 20
ATCAC 1307015 1.1080202 39.594513 21
CGTTC 1809490 1.095853 27.231237 25
CCTTG 1776695 1.0759919 11.750501 31
GACCT 1607160 1.0745366 15.376842 21
CGTGG 2651165 1.0731523 5.690648 18
CCCTG 1557395 1.0697647 15.627585 2
CTGTG 2260120 1.0507398 10.206378 21
ATTGT 2010280 1.0447966 28.252813 12
CTCTG 1707530 1.0341045 5.9791255 32
TGAGG 2597160 1.0232832 34.622955 1
CTCGC 1480605 1.0170182 31.299206 26
ACGTT 1702485 1.0035799 26.51676 24
TTGTA 1928570 1.0023298 36.47496 13
GATTG 2205530 0.99804276 25.22276 11
AGGCT 1941255 0.99635065 15.91572 18
GGCTT 2137980 0.9939563 17.583935 19
AGATT 1722320 0.9882232 31.086466 10
CCTGT 1630395 0.98739046 12.7147255 18
TTCAA 1317035 0.98439854 25.25821 1
AGGAT 1967275 0.98280466 17.04746 13
ATACC 1157180 0.98099774 12.895331 19
CCGTG 1858470 0.9799696 5.535971 18
GAGGT 2476550 0.9757628 36.4966 2
CAGGA 1682105 0.95312244 19.475985 12
AGTTT 1829650 0.9509184 26.386023 19
TCCCG 1379920 0.94785833 14.026946 12
TCCGT 1562935 0.9465357 29.213823 4
TCTGG 2035820 0.9464617 6.8492184 8
TAGAT 1637100 0.9393262 31.003101 9
ACCTG 1403430 0.93832403 15.579575 22
TGTAG 2064285 0.934127 22.335894 11
ACCAC 967960 0.93071765 8.289176 2
GCATT 1559480 0.91928136 30.968838 1
TTCAG 1555260 0.91679376 27.619684 11
ACTCT 1193875 0.9167691 6.8684616 23
TGTAT 1759325 0.9143686 34.807266 14
GTTCA 1523535 0.89809257 27.794447 10
TTCCG 1474985 0.8932719 28.890856 3
TTTCC 1278555 0.88931286 32.237263 2
ATTGG 1964990 0.889194 18.185856 3
GGTGG 2852650 0.88642216 18.002157 6
CCCAA 914415 0.8792328 22.391937 10
GGTTC 1847310 0.85882246 22.0707 9
ATCCC 985300 0.8581497 27.322844 8
GTTCG 1833590 0.85244405 20.926792 26
CCGTA 1238595 0.8281164 31.641035 5
AACAT 983340 0.8114156 15.480638 5
TGGTG 2244070 0.80088025 18.655462 5
CCCGG 1334150 0.7979123 11.774885 13
TGGTA 1754410 0.7939027 21.680662 16
GTTAT 1523525 0.791817 24.477728 18
CTCAG 1180615 0.7893514 10.825076 11
GCACT 1167340 0.7804758 15.696966 5
TGCTG 1662820 0.77305233 6.8589725 16
CCAAA 813275 0.7611505 20.602537 11
AAGCA 1057730 0.7599333 16.145864 15
CCAGG 1304810 0.7595744 16.898449 11
CAAGT 1155065 0.751694 22.103895 3
CGACC 989805 0.75059414 9.985495 3
CAACG 1012995 0.74771374 16.66032 1
TCACA 878065 0.7443784 24.960901 2
CGGTA 1450235 0.74433434 7.0792727 17
AAGTA 1173060 0.74306613 21.47192 4
AGCAT 1135175 0.7387499 9.015332 23
CTGAA 1134495 0.7383075 8.503208 8
TGAAT 1286415 0.7381121 9.334152 9
ACATC 869595 0.73719794 16.042988 6
TCCCA 846105 0.7369173 19.190092 9
CGCTG 1393800 0.7349495 9.101167 10
CCCGT 1068285 0.7337982 5.1730194 10
AGCTC 1095505 0.7324474 11.125266 9
AAAGC 1016625 0.7304011 16.027567 14
ATTGC 1237110 0.72925085 14.425119 2
AATAC 876960 0.7236348 7.797457 18
GCCTT 1189810 0.720566 11.767733 30
CACTT 936455 0.7190979 17.611303 6
GAATC 1097625 0.7143131 14.868422 6
GGCTA 1390855 0.71385753 13.399279 9
ACGGT 1380545 0.7085658 6.634507 45
TTCGC 1167675 0.70716065 27.721003 27
TAGGC 1376810 0.7066489 15.677314 17
CTGTA 1198565 0.70652944 6.1617346 19
GTTTC 1318830 0.70419276 24.792225 1
TTCCC 887035 0.69979256 5.762978 8
CACCA 725325 0.69741803 7.3432717 1
ATTCC 889520 0.68305683 9.004466 12
TGGCT 1458415 0.6780236 12.427208 8
CCGCC 869780 0.6776296 7.3302584 9
GCTAA 1037055 0.6748954 18.81342 10
CGTAG 1313205 0.6740035 24.548655 6
ATAGG 1340745 0.66980505 18.736547 16
AGACC 898590 0.6632689 7.443784 6
GTAAT 1148765 0.65913206 19.591501 6
TTGCA 1115340 0.65747 14.142614 3
CAAAA 719150 0.65512645 20.628635 12
AGTAA 1032380 0.6539534 21.394197 5
TCCCT 825525 0.6512665 17.202042 1
TTCTG 1209660 0.6459011 7.4330335 16
AAAAG 922035 0.64479345 15.777055 13
AGCAG 1137120 0.6443204 12.711499 16
ATCCA 759720 0.6440516 23.968481 9
TCGGT 1382045 0.6425188 8.725313 15
CCATA 756865 0.6416313 9.726139 15
GGATA 1275115 0.63701785 16.95082 14
CTACT 827045 0.63508266 10.719166 13
ACAGT 974510 0.6341923 16.973854 4
GGTCT 1364045 0.6341505 8.864191 9
GTTCC 1026660 0.62175995 7.861424 15
GTCGG 1520195 0.61535245 7.7536087 14
TCCTT 883445 0.61448973 7.7648125 11
CAGCT 917225 0.61325055 15.711002 18
CGGCC 1024895 0.6129568 11.859235 15
GGATT 1353090 0.6122981 8.225394 22
AACGC 828935 0.61185503 12.837424 8
GATAG 1223530 0.6112471 17.1023 15
ACATG 938925 0.6110342 6.299232 22
GCTAC 913630 0.610847 11.52078 2
CACAG 823185 0.6076108 20.333569 3
GGACT 1183510 0.6074375 8.772624 4
ACGGA 1059945 0.6005911 13.570686 3
CAGAA 832265 0.5979464 11.24567 15
AGAGC 1048840 0.5942988 8.278398 21
TGAGA 1186800 0.5928977 6.316526 2
CGGAA 1044045 0.5915818 12.829288 4
ACATT 790905 0.5911504 13.990213 2
TCAAG 905650 0.58937955 21.998602 2
TTGTG 1436310 0.5887331 6.0027976 13
GTGCT 1266330 0.5887224 6.751438 15
AGTGT 1288360 0.5830065 21.38477 9
TAATC 773980 0.57850003 21.400648 7
GGCCT 1095130 0.5774611 10.756198 16
ACCTC 660635 0.57538176 12.224055 5
GTGTA 1258845 0.5696505 21.881296 10
CTAAG 870825 0.56671613 17.304604 11
GCCCA 745910 0.5656424 5.0303984 31
AATTG 982060 0.563481 5.127645 11
AAACA 617470 0.5624987 17.2014 4
TGACC 839495 0.56128085 15.1823 20
CCGGC 937825 0.56088305 11.75605 14
TCTAG 946920 0.55818987 11.897642 11
TTGGT 1360955 0.5578456 16.71605 4
GCAGC 955850 0.55643296 12.827526 17
GTTAG 1226425 0.5549799 9.5932455 18
TCGGC 1045645 0.5513677 6.2817135 26
CCACG 726900 0.5512267 5.5228477 3
CCCCG 701660 0.54665035 7.484123 10
GATTC 922260 0.54365325 10.442487 23
TTTTG 1153470 0.5430197 5.480527 14
TGGTC 1165395 0.5417973 9.36208 8
CTCCT 686535 0.54161566 8.789536 10
CATCT 697375 0.5355099 10.58637 6
GAGAC 943685 0.53471535 5.9114623 5
ATCTG 905715 0.5339004 8.52965 7
CTGGT 1146185 0.5328665 6.7793975 4
CTACA 626985 0.5315257 14.556201 3
TACTC 690115 0.529935 6.520285 22
AAAGA 755690 0.5284658 8.010234 2
GCTCA 782020 0.52285343 11.026003 10
AAGTT 910540 0.5224446 14.989802 13
AGTTC 881610 0.51969093 16.118906 14
GTCTA 878390 0.5177928 11.510721 10
TATGG 1143720 0.5175543 5.713914 22
TTCAC 672725 0.5165813 19.921541 1
CTGTC 852185 0.5160954 12.231334 12
CTGGC 978100 0.5157513 7.7429495 9
TGATC 873165 0.51471287 5.29598 4
TAAAC 623385 0.5143941 15.7022505 3
CACTA 604145 0.5121631 6.3694377 1
GCATC 756640 0.5058845 6.038759 24
GTAAA 790225 0.50056213 12.094829 2
CATTC 651680 0.500421 14.342683 3
CCTCA 573510 0.4995 11.225456 6
TACCA 586670 0.4973487 5.6667843 23
CAAAG 687230 0.49374506 10.031526 1
AGCTA 753300 0.49023306 11.2722645 1
ATTCA 655540 0.48997378 13.775236 4
TGCAC 728145 0.48683295 15.73955 4
CATCC 558370 0.4863138 16.273924 7
ACCGG 832140 0.48441708 5.2923417 21
GTAGG 1229265 0.4843315 6.354827 8
GTCCC 699015 0.480149 13.512735 11
TAAGT 834265 0.47867998 15.170494 12
TCAAC 563575 0.47776994 14.556502 6
AGGTT 1039345 0.47032264 7.3811007 10
AACGG 825295 0.46763265 13.394995 2
TACCG 697060 0.46604976 6.1923943 20
CCCAT 533925 0.46502343 6.1474533 1
GACCG 796050 0.46340787 6.2626243 7
GAATA 731035 0.46306863 5.972383 17
TAGGA 921920 0.4605698 9.119805 20
AGTCG 895625 0.45968023 7.4327526 14
GTGGC 1122225 0.45426008 11.309956 7
TTGTC 850120 0.45392382 12.37737 9
GACAT 697465 0.45389673 5.3021817 21
TGTAA 789955 0.45325604 10.960909 1
TACTG 768790 0.4531859 8.2745285 14
ATCCT 588580 0.4519669 7.617956 8
GACCC 595910 0.45189363 7.284749 24
TTCGG 971470 0.45164067 5.5375304 25
CTTTT 726500 0.44553038 6.935814 13
CTGGG 1099395 0.44501883 5.632192 16
CGGTG 1098005 0.44445616 7.727783 16
CCGAC 585515 0.44401082 8.315026 12
TTCCA 572690 0.43976504 8.740705 13
CAGAT 673360 0.43820965 8.520628 9
CGACT 653155 0.43669513 8.273187 13
TAGGT 962960 0.43575707 6.945544 9
CTTGT 815780 0.43558785 12.315753 8
GCCCG 724900 0.43353942 8.39421 1
GATCA 663520 0.43180597 8.760262 11
TATTG 825805 0.42919308 10.3245535 1
TAGAG 851530 0.4254046 7.182546 20
CTAGT 720355 0.42463446 7.464751 12
CCTTT 609630 0.42403474 7.724915 12
CCCAG 551860 0.4184894 5.000707 32
ACCGC 549225 0.4164912 7.0358586 8
TCGTA 702760 0.41426256 5.4044404 7
CCCGC 528115 0.4114447 7.041785 26
GTCAG 800500 0.41085723 8.3540535 13
GCGAC 702325 0.4088474 7.4792976 2
AGTAC 619480 0.40314558 5.2732196 20
TCCCC 450065 0.40271446 8.407685 9
TCTCC 509925 0.40228593 8.917487 9
TGACA 615475 0.4005393 5.0037184 20
TCCAT 520330 0.39955813 8.914299 14
ACCCG 520555 0.39474997 7.2993913 25
CATCA 465615 0.3947245 7.556919 25
GGCGC 858380 0.39409202 5.031507 28
AGCAC 532835 0.39329717 5.2066617 15
GTTGT 959365 0.39323676 5.588258 12
ATCGT 666110 0.39265814 5.051959 6
GGTGA 996110 0.39246818 6.8113728 17
CGGCG 850860 0.39063948 5.240108 27
TACAT 515380 0.3852133 12.664445 4
CCGGA 660785 0.3846655 5.6623573 3
TGTCC 633265 0.3835143 11.551967 10
TGGAC 746895 0.3833445 8.408062 3
GAGAA 692590 0.38198328 6.7949157 3
GAAGC 673265 0.38148865 7.5574856 19
TTGAG 842410 0.38120604 5.3407645 1
CCCGA 501740 0.38048214 7.3606386 11
TTTGT 794110 0.3738436 8.291423 12
TCTCT 536635 0.3732623 7.749992 21
GAAGG 850680 0.37002355 6.6836247 17
TGAGT 807000 0.3651823 7.345507 19
GAGCA 644310 0.36508203 8.056621 22
GGTCC 686250 0.361859 6.3989735 5
GTCCG 679835 0.3584764 6.517346 6
TCCGA 532595 0.3560895 7.8233595 7
ACGCT 531575 0.35540754 11.335817 9
CATAG 545350 0.35490322 9.872117 16
AGAAA 507125 0.35464042 5.203804 11
AGCCC 463935 0.35181364 5.27975 10
AGATC 537540 0.3498206 8.369261 10
GTTCT 652770 0.34854823 7.2528396 15
CAGCA 470830 0.34752992 5.4796014 4
ATTCG 584295 0.34442988 7.0472136 24
AGACG 603260 0.3418221 6.754727 15
ACGTG 665545 0.34159148 5.7638144 17
CGGAT 663100 0.34033665 5.0687404 4
GGTTG 950725 0.33930176 5.892536 11
AGAAG 613165 0.33817813 8.589565 16
TTAGG 744205 0.33676645 8.068118 19
CCGCT 478875 0.32893622 6.194951 27
GTGAG 825035 0.3250645 6.402003 18
GGAAG 744460 0.32382065 6.1897087 18
GTCTC 522455 0.3164062 6.9843235 20
TGTCG 668070 0.3105887 8.618437 13
AAGGC 542330 0.30729765 6.660566 18
CGCGA 510195 0.29700193 7.6002827 1
GACGT 555540 0.28513134 6.071147 16
GAGTC 554475 0.28458473 8.129501 11
TGGAG 717740 0.28279018 6.4119024 9
TGTTT 594030 0.27965182 5.49813 19
GGGTC 681110 0.27570325 5.511091 18
ATAAA 340985 0.27387193 5.726153 4
GCTCC 386125 0.2652268 5.15695 14
ATAGC 405985 0.2642072 6.478231 7
GGAGT 663305 0.26134273 6.298015 10
ACCAG 347780 0.25670403 5.092256 24
CATAA 292360 0.2412446 5.7661824 3
TGTGC 505840 0.23516725 6.5914364 14
TTACC 251505 0.1931291 5.125129 22
ACCTA 207190 0.17564504 5.382624 6